SNP Profiles of ICS 41   View Data

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 Key

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_Input profile
TTCCCCGGCTGGACCCAACCAGGGAACC
1._RUQ_1218
__AC_____AA_AG___
2._RUQ_1218
AACCACCCAGGGACGGAAGGAGGGAACG
3._ICS_41_Fld#_15_Plt#_1
GGACACCCAGAACCCGAGAGAGAGATCG
 1516171819202122232425262728
_Input profile
AGACCCGTGGCCCCTTCTGGAGTTACCG
1._RUQ_1218
_AC__GGCCCC_CTGGAG_ACCG
2._RUQ_1218
_AC_ACGGCCGGAA_CCAGAAACCG
3._ICS_41_Fld#_15_Plt#_1
_CC_ACCCCCGGAG_AAAGACCCCG
 2930313233343536373839404142
_Input profile
CCTTAGCCCTGGGGTTGTCTCCCCCGGG
1._RUQ_1218
__AGCC____GT___CG_
2._RUQ_1218
_AGAG_AGCCGG_ACAGGGGGCGGG
3._ICS_41_Fld#_15_Plt#_1
_GGAG_AGAAGG_AAAGGGAGCCAG

Input profile: ICS_41 RUQ_1218

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._ICS_41 RUQ_1218

96.9 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._ICS_41 RUQ_1218

50 %
36 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._ICS_41 ICS_41_Fld#_15_Plt#_1

33.3 %
36 shared markers

USDA-TARS, United States of America
Location: Field: 15, Tree: 1
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484